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How Viral Interactions in Coinfection Shape Viral Kinetics

Citation

DeAguero, Joseph. (2018-12). How Viral Interactions in Coinfection Shape Viral Kinetics. Theses and Dissertations Collection, University of Idaho Library Digital Collections. https://www.lib.uidaho.edu/digital/etd/items/deaguero_idaho_0089n_11478.html

Title:
How Viral Interactions in Coinfection Shape Viral Kinetics
Author:
DeAguero, Joseph
ORCID:
0000-0002-8545-7274
Date:
2018-12
Program:
Bioinformatics & Computational Biology
Subject Category:
Mathematics; Biology
Abstract:

Coinfections with more than one respiratory virus can enhance or inhibit virus growth kinetics and disease severity depending on the underlying mechanism of interaction. Although some mechanisms are known (e.g., enhanced virus entry), viral-viral coinfections are only beginning to be examined in the laboratory and clinic. Thus, to understand how different mechanisms of viral interactions can affect viral titer kinetics, we developed and analyzed a mathematical model. Here, we focused on how coinfection leading to increases or decreases in viral infection rate, viral production rate, viral clearance rate, and infected cell death rate alters viral kinetics. While each of these types of interactions can lead to increases or decreases in total virus produced, each interaction type alters the viral kinetics in characteristic ways. We found that decreasing the viral clearance rate leads to the largest increase in total virus produced relative to coinfection without direct interactions. We varied the strength of interactions and timing of viral infections to determine how these critical factors impact results. Our results suggest that the mechanisms underlying virus-virus interactions and the relative timing of infection of the two viruses impact the rate of viral titer increase, the timing of peak, and the rate of viral titer decrease after peak, and thus the total duration and severity of disease.

Description:
masters, M.S., Bioinformatics & Computational Biology -- University of Idaho - College of Graduate Studies, 2018-12
Major Professor:
Remien, Christopher
Committee:
Muira, Tanya; Foster, James; Smith, Amber
Defense Date:
2018-12
Identifier:
DeAguero_idaho_0089N_11478
Type:
Text
Format Original:
PDF
Format:
application/pdf

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